Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage putative head morphogenesis protein, spp1 gp7 family | SAMN03080610_00383 | Not Available | Positive | 412622 - 414232 | 60542.0 |
| protein of unknown function | SAMN03080610_00384 | Not Available | Positive | 414417 - 414782 | 13295.5 |
| glycyl-trna synthetase beta chain | SAMN03080610_00385 | Not Available | Negative | 414939 - 417056 | 77236.5 |
| hypothetical protein | SAMN03080610_00386 | Not Available | Negative | 417066 - 417545 | 18054.4 |
| glycyl-trna synthetase alpha chain | SAMN03080610_00387 | Not Available | Negative | 417547 - 418485 | 34888.1 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN03080610_00388 | Not Available | Negative | 418609 - 419481 | 29900.9 |
| tetratricopeptide repeat-containing protein | SAMN03080610_00389 | Not Available | Negative | 419624 - 421444 | 66009.1 |
| octaprenyl-diphosphate synthase | SAMN03080610_00390 | Not Available | Negative | 421569 - 422585 | 36286.4 |
| putative signal transducing protein | SAMN03080610_00391 | Not Available | Positive | 422742 - 422978 | 8493.26 |
| trna1(val) a37 n6-methylase trmn6 | SAMN03080610_00392 | Not Available | Positive | 422982 - 423752 | 27033.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
