Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation factor sua5 | SAMN03080610_00343 | Not Available | Positive | 373849 - 374868 | 34938.1 |
| acetoin utilization deacetylase acuc | SAMN03080610_00344 | Not Available | Positive | 374966 - 375892 | 33143.0 |
| exodeoxyribonuclease vii small subunit | SAMN03080610_00345 | Not Available | Positive | 375902 - 376153 | 9168.79 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN03080610_00346 | Not Available | Positive | 376275 - 378200 | 69186.9 |
| superoxide dismutase, cu-zn family | SAMN03080610_00347 | Not Available | Negative | 378294 - 378833 | 18710.7 |
| snoal-like polyketide cyclase | SAMN03080610_00348 | Not Available | Negative | 379008 - 379205 | 7281.65 |
| hypothetical protein | SAMN03080610_00349 | Not Available | Negative | 379202 - 379417 | 8308.78 |
| hypothetical protein | SAMN03080610_00350 | Not Available | Positive | 379781 - 379921 | 5136.51 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN03080610_00351 | Not Available | Positive | 379982 - 380725 | 25666.8 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN03080610_00352 | Not Available | Positive | 380718 - 381971 | 44496.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
