Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide interchange protein, contains dsbc and dsbd domains | SAMN03080610_00323 | Not Available | Negative | 353251 - 354081 | 29509.1 |
| putative transcriptional regulator | SAMN03080610_00324 | Not Available | Positive | 354236 - 354808 | 20658.6 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_00325 | Not Available | Negative | 354816 - 357710 | 104705.0 |
| [ssu ribosomal protein s5p]-alanine acetyltransferase | SAMN03080610_00326 | Not Available | Negative | 357817 - 358395 | 21808.4 |
| predicted zn-dependent peptidase | SAMN03080610_00327 | Not Available | Negative | 358408 - 359670 | 45402.3 |
| threonine synthase | SAMN03080610_00328 | Not Available | Negative | 359673 - 361082 | 50705.5 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN03080610_00329 | Not Available | Positive | 361190 - 361864 | 24468.9 |
| 2'-5' rna ligase | SAMN03080610_00330 | Not Available | Positive | 361894 - 362400 | 18828.9 |
| ba14k-like protein | SAMN03080610_00331 | Not Available | Negative | 362501 - 362992 | 19029.0 |
| cation diffusion facilitator family transporter | SAMN03080610_00332 | Not Available | Negative | 363194 - 364120 | 32369.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
