Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease i | SAMN03080610_03718 | Not Available | Positive | 3940984 - 3941547 | 20610.5 |
| transposase dde domain-containing protein | SAMN03080610_03719 | Not Available | Negative | 3941717 - 3941947 | 8605.44 |
| transposase dde domain-containing protein | SAMN03080610_03720 | Not Available | Positive | 3941948 - 3942103 | 5525.76 |
| small subunit ribosomal protein s4 | SAMN03080610_03722 | Not Available | Negative | 3942257 - 3942877 | 23764.6 |
| uncharacterized conserved protein | SAMN03080610_03723 | Not Available | Positive | 3943236 - 3944588 | 48724.0 |
| glutamate racemase | SAMN03080610_03724 | Not Available | Negative | 3944671 - 3945453 | 28399.7 |
| trna/rrna methyltransferase | SAMN03080610_03725 | Not Available | Negative | 3945459 - 3946268 | 29259.2 |
| isocitrate dehydrogenase (nadp) | SAMN03080610_03726 | Not Available | Positive | 3946744 - 3947958 | 45278.8 |
| transposase dde domain-containing protein | SAMN03080610_03727 | Not Available | Negative | 3948115 - 3948330 | 8032.84 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN03080610_03728 | Not Available | Negative | 3948467 - 3950557 | 77387.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
