Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | SAMN03080610_03708 | Not Available | Positive | 3924780 - 3928934 | 154584.0 |
| dna-directed rna polymerase subunit beta' | SAMN03080610_03709 | Not Available | Positive | 3929037 - 3933254 | 155606.0 |
| transposase dde domain-containing protein | SAMN03080610_03710 | Not Available | Positive | 3933930 - 3934085 | 5525.76 |
| single-strand dna-binding protein | SAMN03080610_03711 | Not Available | Negative | 3934247 - 3934732 | 17796.7 |
| hypothetical protein | SAMN03080610_03712 | Not Available | Positive | 3934905 - 3935330 | 15439.9 |
| excinuclease abc subunit a | SAMN03080610_03713 | Not Available | Positive | 3935448 - 3938330 | 105161.0 |
| predicted ntp pyrophosphohydrolase, nudix family | SAMN03080610_03714 | Not Available | Positive | 3938376 - 3938804 | 15980.9 |
| voltage-gated potassium channel | SAMN03080610_03715 | Not Available | Positive | 3939009 - 3939821 | 30439.6 |
| protein of unknown function | SAMN03080610_03716 | Not Available | Positive | 3939997 - 3940155 | 6100.46 |
| hypothetical protein | SAMN03080610_03717 | Not Available | Negative | 3940260 - 3940868 | 22684.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
