Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_00313 | Not Available | Negative | 343540 - 344067 | 19364.3 |
| myo-inositol-1(or 4)-monophosphatase | SAMN03080610_00314 | Not Available | Positive | 344247 - 345098 | 31000.4 |
| protein of unknown function | SAMN03080610_00315 | Not Available | Positive | 345112 - 345366 | 9718.61 |
| atp-binding cassette, subfamily b, msba | SAMN03080610_00316 | Not Available | Positive | 345350 - 347182 | 66363.4 |
| hypothetical protein | SAMN03080610_00317 | Not Available | Positive | 347185 - 347883 | 24724.2 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN03080610_00318 | Not Available | Positive | 347876 - 349225 | 48746.0 |
| lipid-a-disaccharide kinase | SAMN03080610_00319 | Not Available | Positive | 349229 - 350221 | 35508.6 |
| hypothetical protein | SAMN03080610_00320 | Not Available | Negative | 350240 - 350470 | 8408.01 |
| monovalent cation:h+ antiporter-2, cpa2 family | SAMN03080610_00321 | Not Available | Negative | 350512 - 352380 | 67410.7 |
| peroxiredoxin | SAMN03080610_00322 | Not Available | Negative | 352642 - 353127 | 16743.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
