Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN03080610_03698 | Not Available | Negative | 3918252 - 3919247 | 36647.0 |
| transposase dde domain-containing protein | SAMN03080610_03699 | Not Available | Negative | 3919570 - 3919725 | 5525.76 |
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN03080610_03700 | Not Available | Positive | 3919726 - 3920901 | 42885.4 |
| Trna-trp | Not Available | Not Available | Positive | 3921093 - 3921168 | Not Available |
| protein translocase subunit sece/sec61 gamma | SAMN03080610_03702 | Not Available | Positive | 3921301 - 3921498 | 7284.12 |
| transcription antitermination protein nusg | SAMN03080610_03703 | Not Available | Positive | 3921518 - 3922048 | 19902.8 |
| lsu ribosomal protein l11p | SAMN03080610_03704 | Not Available | Positive | 3922218 - 3922646 | 15072.5 |
| large subunit ribosomal protein l1 | SAMN03080610_03705 | Not Available | Positive | 3922651 - 3923349 | 24606.7 |
| lsu ribosomal protein l10p | SAMN03080610_03706 | Not Available | Positive | 3923678 - 3924196 | 17971.8 |
| large subunit ribosomal protein l7/l12 | SAMN03080610_03707 | Not Available | Positive | 3924248 - 3924628 | 12955.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
