Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit alpha | SAMN03080610_03678 | Not Available | Positive | 3895399 - 3896418 | 37367.7 |
| large subunit ribosomal protein l17 | SAMN03080610_03679 | Not Available | Positive | 3896469 - 3896894 | 15952.3 |
| do/deqq family serine protease | SAMN03080610_03680 | Not Available | Positive | 3897098 - 3898543 | 50499.4 |
| putative atpase | SAMN03080610_03681 | Not Available | Positive | 3898551 - 3899876 | 48862.0 |
| betaine/carnitine transporter, bcct family | SAMN03080610_03682 | Not Available | Positive | 3900270 - 3901904 | 58588.5 |
| transposase domain | SAMN03080610_03683 | Not Available | Positive | 3902006 - 3902283 | 10735.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN03080610_03684 | Not Available | Negative | 3902424 - 3903695 | 43762.1 |
| simple sugar transport system permease protein | SAMN03080610_03685 | Not Available | Positive | 3904044 - 3905126 | 37422.8 |
| simple sugar transport system permease protein | SAMN03080610_03686 | Not Available | Positive | 3905135 - 3906193 | 36846.4 |
| 6-phospho-3-hexuloisomerase | SAMN03080610_03687 | Not Available | Positive | 3906207 - 3906767 | 20117.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
