Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | SAMN03080610_03627 | Not Available | Negative | 3851398 - 3852099 | 26764.0 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN03080610_03628 | Not Available | Negative | 3852197 - 3853492 | 46885.3 |
| imp dehydrogenase | SAMN03080610_03629 | Not Available | Negative | 3853600 - 3855102 | 52854.4 |
| polyisoprenoid-binding protein ycei | SAMN03080610_03630 | Not Available | Negative | 3855420 - 3856040 | 21910.7 |
| 23s rrna um-2552 2'-o-methyltransferase | SAMN03080610_03631 | Not Available | Negative | 3856185 - 3856850 | 23976.7 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN03080610_03632 | Not Available | Negative | 3856957 - 3858273 | 48401.9 |
| Trna-gln | Not Available | Not Available | Positive | 3858613 - 3858686 | Not Available |
| hypothetical protein | SAMN03080610_03634 | Not Available | Negative | 3858982 - 3859584 | 21184.1 |
| hypothetical protein | SAMN03080610_03635 | Not Available | Negative | 3860063 - 3860263 | 7717.6 |
| transposase | SAMN03080610_03636 | Not Available | Positive | 3860377 - 3860709 | 12146.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
