Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucyl-trna synthetase | SAMN03080610_00303 | Not Available | Positive | 331517 - 334435 | 109930.0 |
| signal peptidase ii | SAMN03080610_00304 | Not Available | Positive | 334536 - 335021 | 17769.0 |
| hypothetical protein | SAMN03080610_00305 | Not Available | Positive | 335123 - 335776 | 23364.8 |
| dna mismatch repair protein mutl | SAMN03080610_00306 | Not Available | Positive | 335857 - 337731 | 67266.8 |
| 16s rrna (guanine966-n2)-methyltransferase | SAMN03080610_00307 | Not Available | Negative | 337741 - 338325 | 20572.9 |
| 23s rrna pseudouridine2605 synthase | SAMN03080610_00308 | Not Available | Negative | 338300 - 339532 | 43793.2 |
| trna(adenine34) deaminase | SAMN03080610_00309 | Not Available | Positive | 339588 - 340019 | 15193.2 |
| nte family protein | SAMN03080610_00310 | Not Available | Negative | 340016 - 340912 | 32440.5 |
| phosphoribosylamine--glycine ligase | SAMN03080610_00311 | Not Available | Negative | 341150 - 342409 | 43842.6 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN03080610_00312 | Not Available | Positive | 342527 - 343477 | 34343.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
