Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | SAMN03080610_03567 | Not Available | Negative | 3791643 - 3792185 | 19846.4 |
| hypothetical protein | SAMN03080610_03568 | Not Available | Negative | 3792187 - 3792471 | 10556.5 |
| two-component system, ompr family, response regulator | SAMN03080610_03569 | Not Available | Positive | 3792630 - 3793286 | 24002.9 |
| two-component system, ompr family, sensor kinase | SAMN03080610_03570 | Not Available | Positive | 3793283 - 3794623 | 48368.3 |
| 3-octaprenyl-4hydroxybenzoate decarboxylase | SAMN03080610_03571 | Not Available | Negative | 3794639 - 3796165 | 55851.6 |
| predicted lipid carrier protein yhbt, contains scp2 domain | SAMN03080610_03572 | Not Available | Positive | 3796263 - 3796823 | 20686.4 |
| putative protease | SAMN03080610_03573 | Not Available | Positive | 3796820 - 3797806 | 35349.9 |
| collagenase-like protease, prtc family | SAMN03080610_03574 | Not Available | Positive | 3797841 - 3798770 | 33531.4 |
| addiction module antidote protein, higa family | SAMN03080610_03575 | Not Available | Negative | 3798802 - 3799176 | 14159.8 |
| hypothetical protein | SAMN03080610_03576 | Not Available | Negative | 3799173 - 3799430 | 9617.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
