Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt/nickel transport protein | SAMN03080610_03557 | Not Available | Positive | 3783419 - 3784216 | 28785.2 |
| cobalt/nickel transport system permease protein | SAMN03080610_03558 | Not Available | Positive | 3784232 - 3784864 | 21307.7 |
| nickel transport protein | SAMN03080610_03559 | Not Available | Positive | 3784861 - 3785499 | 21812.0 |
| cobalt/nickel transport system permease protein | SAMN03080610_03560 | Not Available | Positive | 3785502 - 3786284 | 28736.2 |
| cobalt/nickel transport system atp-binding protein | SAMN03080610_03561 | Not Available | Positive | 3786296 - 3786982 | 25146.6 |
| hypothetical protein nrea | SAMN03080610_03562 | Not Available | Positive | 3787149 - 3787412 | 9894.79 |
| high-affinity nickel-transport protein | SAMN03080610_03563 | Not Available | Positive | 3787423 - 3788322 | 31522.6 |
| uncharacterized membrane protein yjjp, duf1212 family | SAMN03080610_03564 | Not Available | Positive | 3788485 - 3789795 | 45783.9 |
| predicted arabinose efflux permease, mfs family | SAMN03080610_03565 | Not Available | Positive | 3789951 - 3791186 | 43041.8 |
| transcriptional regulator, trar/dksa family | SAMN03080610_03566 | Not Available | Positive | 3791229 - 3791585 | 12927.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
