Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, multidrug efflux system | SAMN03080610_03546 | Not Available | Positive | 3769448 - 3770608 | 41104.6 |
| multidrug efflux pump | SAMN03080610_03547 | Not Available | Positive | 3770621 - 3773713 | 109944.0 |
| two-component system, ompr family, response regulator ader | SAMN03080610_03548 | Not Available | Positive | 3773769 - 3774470 | 25320.7 |
| two-component system, ompr family, sensor histidine kinase ades | SAMN03080610_03549 | Not Available | Positive | 3774463 - 3775545 | 39023.7 |
| uncharacterised mfs-type transporter ybfb | SAMN03080610_03550 | Not Available | Negative | 3775597 - 3776811 | 41922.4 |
| transcriptional regulator, lysr family | SAMN03080610_03551 | Not Available | Negative | 3776798 - 3777697 | 32802.7 |
| hypothetical protein | SAMN03080610_03552 | Not Available | Positive | 3777855 - 3779030 | 44993.6 |
| protein n-acetyltransferase, rimj/riml family | SAMN03080610_03553 | Not Available | Negative | 3779073 - 3779615 | 20466.3 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN03080610_03554 | Not Available | Negative | 3779747 - 3780844 | 38295.7 |
| atp-dependent rna helicase rhle | SAMN03080610_03555 | Not Available | Positive | 3781302 - 3782882 | 56461.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
