Afifella marina DSM 2698

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Afifellaceae

Genus

Afifella

Description

Afifella marina DSM 2698 is an anaerobic bacterium, indicating that it thrives in environments devoid of oxygen. This trait is significant as it suggests a specific niche within the microbial community where this organism can survive and proliferate. The bacterium has a single replicon, which is characteristic of certain prokaryotic organisms and can influence its genetic stability and replication processes. The accession number for Afifella marina DSM 2698 is FMVW00000000.1, which serves as a reference for genomic data associated with this strain. This information is essential for researchers looking to explore its genetic makeup and potential functions further. Understanding the anaerobic nature of Afifella marina DSM 2698 provides insights into its ecological role. Such organisms often contribute to biogeochemical cycles, particularly in marine environments where anoxic conditions prevail. Their metabolic processes can impact nutrient cycling and the overall health of the ecosystem, highlighting the importance of studying anaerobic bacteria within diverse habitats. The presence of Afifella marina DSM 2698 in such ecosystems may offer opportunities to explore its potential applications in biotechnology, particularly in processes that require anaerobic conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAfifellaceae
GenusAfifella
SpeciesAfifella marina
StrainDSM 2698

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Afifella marina DSM 2698 genome assembly, contig:

Gene Summary

Adenine Count

721670 bp

Thymine Count

734935 bp

Guanine Count

1271881 bp

Cytosine Count

1234935 bp

Genome Length

3963421 bp

Protein-coding Genes

3640 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane fusion protein, multidrug efflux systemSAMN03080610_03546Not AvailablePositive3769448 - 377060841104.6
multidrug efflux pumpSAMN03080610_03547Not AvailablePositive3770621 - 3773713109944.0
two-component system, ompr family, response regulator aderSAMN03080610_03548Not AvailablePositive3773769 - 377447025320.7
two-component system, ompr family, sensor histidine kinase adesSAMN03080610_03549Not AvailablePositive3774463 - 377554539023.7
uncharacterised mfs-type transporter ybfbSAMN03080610_03550Not AvailableNegative3775597 - 377681141922.4
transcriptional regulator, lysr familySAMN03080610_03551Not AvailableNegative3776798 - 377769732802.7
hypothetical proteinSAMN03080610_03552Not AvailablePositive3777855 - 377903044993.6
protein n-acetyltransferase, rimj/riml familySAMN03080610_03553Not AvailableNegative3779073 - 377961520466.3
n-acetylglucosamine-6-phosphate deacetylaseSAMN03080610_03554Not AvailableNegative3779747 - 378084438295.7
atp-dependent rna helicase rhleSAMN03080610_03555Not AvailablePositive3781302 - 378288256461.7

Displaying genes 3531 – 3540 of 3724 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.