Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN03080610_03536 | Not Available | Positive | 3759451 - 3760686 | 43765.1 |
| trna 2-thiocytidine biosynthesis protein ttca | SAMN03080610_03537 | Not Available | Negative | 3760751 - 3761668 | 34089.2 |
| transposase domain | SAMN03080610_03538 | Not Available | Positive | 3761757 - 3762054 | 11462.1 |
| permuted papain-like amidase enzyme, yaef/yiix, c92 family | SAMN03080610_03539 | Not Available | Positive | 3762543 - 3763274 | 26991.0 |
| transcriptional regulator, lysr family | SAMN03080610_03540 | Not Available | Negative | 3763565 - 3764425 | 30987.3 |
| nadph2:quinone reductase | SAMN03080610_03541 | Not Available | Positive | 3764518 - 3765480 | 33125.2 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN03080610_03542 | Not Available | Negative | 3765543 - 3766148 | 20397.7 |
| predicted arabinose efflux permease, mfs family | SAMN03080610_03543 | Not Available | Negative | 3766138 - 3767433 | 45604.3 |
| mutator mutt protein | SAMN03080610_03544 | Not Available | Negative | 3767693 - 3768157 | 16550.6 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_03545 | Not Available | Negative | 3768290 - 3769159 | 31157.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
