Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_03476 | Not Available | Negative | 3709384 - 3709737 | 13258.9 |
| nifu homolog involved in fe-s cluster formation | SAMN03080610_03477 | Not Available | Negative | 3709742 - 3710239 | 17710.8 |
| gtp cyclohydrolase i | SAMN03080610_03478 | Not Available | Positive | 3710363 - 3710983 | 23027.5 |
| phosphoribosyl-amp cyclohydrolase | SAMN03080610_03479 | Not Available | Positive | 3710997 - 3711410 | 15432.3 |
| cbs domain-containing protein | SAMN03080610_03480 | Not Available | Negative | 3711420 - 3711848 | 15747.2 |
| membrane associated serine protease, rhomboid family | SAMN03080610_03481 | Not Available | Negative | 3711998 - 3712693 | 24265.1 |
| hypothetical protein | SAMN03080610_03482 | Not Available | Positive | 3712767 - 3712913 | 5679.68 |
| pilz domain-containing protein | SAMN03080610_03483 | Not Available | Positive | 3712910 - 3713575 | 24554.6 |
| predicted transglutaminase-like cysteine proteinase | SAMN03080610_03484 | Not Available | Positive | 3713804 - 3714469 | 24554.3 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN03080610_03485 | Not Available | Negative | 3714592 - 3715119 | 18594.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
