Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic sensor diguanylate cyclase/phosphodiesterase | SAMN03080610_03466 | Not Available | Positive | 3698729 - 3700903 | 80628.0 |
| aaa domain-containing protein | SAMN03080610_03467 | Not Available | Negative | 3700920 - 3701444 | 19018.8 |
| divalent cation tolerance protein | SAMN03080610_03468 | Not Available | Negative | 3701441 - 3701806 | 13375.9 |
| nad+ kinase | SAMN03080610_03469 | Not Available | Positive | 3701952 - 3702731 | 28402.4 |
| uncharacterized conserved protein, duf2336 family | SAMN03080610_03470 | Not Available | Negative | 3702735 - 3703877 | 41092.9 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN03080610_03471 | Not Available | Positive | 3704002 - 3704922 | 31773.7 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN03080610_03472 | Not Available | Negative | 3704888 - 3705505 | 22693.9 |
| nitroreductase | SAMN03080610_03473 | Not Available | Negative | 3705515 - 3706123 | 22028.4 |
| hypothetical protein | SAMN03080610_03474 | Not Available | Positive | 3706204 - 3707337 | 39962.9 |
| threonyl-trna synthetase | SAMN03080610_03475 | Not Available | Negative | 3707355 - 3709367 | 75880.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
