Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | SAMN03080610_03446 | Not Available | Positive | 3675362 - 3676333 | 34576.7 |
| cytochrome c peroxidase | SAMN03080610_03447 | Not Available | Positive | 3676546 - 3677610 | 38372.2 |
| transposase domain | SAMN03080610_03448 | Not Available | Positive | 3677728 - 3677996 | 10288.6 |
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN03080610_03449 | Not Available | Negative | 3678013 - 3679188 | 42885.4 |
| Trna-gly | Not Available | Not Available | Positive | 3679421 - 3679494 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 3679514 - 3679598 | Not Available |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN03080610_03452 | Not Available | Positive | 3679671 - 3680576 | 32208.7 |
| ba14k-like protein | SAMN03080610_03453 | Not Available | Negative | 3680611 - 3681138 | 19579.4 |
| Trna-thr | Not Available | Not Available | Positive | 3681545 - 3681620 | Not Available |
| alcohol dehydrogenase, class iv | SAMN03080610_03455 | Not Available | Negative | 3681932 - 3683065 | 40001.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
