Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN03080610_03436 | Not Available | Positive | 3665747 - 3666535 | 28340.6 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN03080610_03437 | Not Available | Positive | 3666532 - 3667203 | 24241.5 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN03080610_03438 | Not Available | Positive | 3667298 - 3668500 | 41979.8 |
| hypothetical protein | SAMN03080610_03439 | Not Available | Negative | 3668535 - 3669401 | 32465.5 |
| preprotein translocase subunit yajc | SAMN03080610_03440 | Not Available | Positive | 3669557 - 3669895 | 12089.0 |
| preprotein translocase subunit secd | SAMN03080610_03441 | Not Available | Positive | 3669915 - 3671519 | 57406.1 |
| preprotein translocase subunit secf | SAMN03080610_03442 | Not Available | Positive | 3671528 - 3672466 | 33955.6 |
| uncharacterized conserved protein, contains mth938-like domain | SAMN03080610_03443 | Not Available | Positive | 3672466 - 3672879 | 14212.0 |
| phytoene synthase | SAMN03080610_03444 | Not Available | Positive | 3672897 - 3673736 | 29965.0 |
| methylenetetrahydrofolate--trna-(uracil-5-)- methyltransferase | SAMN03080610_03445 | Not Available | Negative | 3673770 - 3675170 | 50795.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
