Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase | SAMN03080610_03406 | Not Available | Positive | 3631830 - 3632378 | 19508.7 |
| cobalamin biosynthesis protein cobw | SAMN03080610_03407 | Not Available | Positive | 3632375 - 3633409 | 36428.3 |
| cobaltochelatase cobn subunit | SAMN03080610_03408 | Not Available | Positive | 3633411 - 3637262 | 138289.0 |
| cob(i)alamin adenosyltransferase | SAMN03080610_03409 | Not Available | Positive | 3637259 - 3637882 | 23210.0 |
| adenosylcobyric acid synthase (glutamine-hydrolysing) | SAMN03080610_03410 | Not Available | Positive | 3637911 - 3639407 | 52515.1 |
| hypothetical protein | SAMN03080610_03411 | Not Available | Negative | 3639410 - 3640267 | 31788.1 |
| adenosylcobinamide-phosphate synthase | SAMN03080610_03412 | Not Available | Negative | 3640369 - 3641334 | 34128.5 |
| l-threonine o-3-phosphate decarboxylase | SAMN03080610_03413 | Not Available | Negative | 3641331 - 3642320 | 36578.9 |
| Trna-cys | Not Available | Not Available | Positive | 3642481 - 3642554 | Not Available |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN03080610_03415 | Not Available | Positive | 3642747 - 3643403 | 23924.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
