Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted purr-regulated permease perm | SAMN03080610_00283 | Not Available | Positive | 311523 - 312587 | 37921.1 |
| l,d-transpeptidase catalytic domain | SAMN03080610_00284 | Not Available | Negative | 312719 - 313348 | 23215.8 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN03080610_00285 | Not Available | Negative | 313493 - 314110 | 23098.9 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN03080610_00286 | Not Available | Negative | 314320 - 315348 | 37454.2 |
| dna-3-methyladenine glycosylase i | SAMN03080610_00287 | Not Available | Positive | 315580 - 316245 | 25213.8 |
| histidyl-trna synthetase | SAMN03080610_00288 | Not Available | Positive | 316401 - 317948 | 56241.6 |
| atp phosphoribosyltransferase regulatory subunit | SAMN03080610_00289 | Not Available | Positive | 318009 - 319109 | 40561.3 |
| atp phosphoribosyltransferase catalytic subunit | SAMN03080610_00290 | Not Available | Positive | 319106 - 319846 | 26694.2 |
| hypothetical protein | SAMN03080610_00291 | Not Available | Positive | 319916 - 320293 | 13269.0 |
| chaperonin groel | SAMN03080610_00292 | Not Available | Negative | 320412 - 322058 | 57787.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
