Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin-requiring enzyme | SAMN03080610_03395 | Not Available | Positive | 3625528 - 3625737 | 7126.87 |
| malonate transporter, madl subunit | SAMN03080610_03396 | Not Available | Positive | 3625808 - 3626248 | 14982.9 |
| malonate transporter, madm subunit | SAMN03080610_03397 | Not Available | Positive | 3626251 - 3627009 | 25088.3 |
| biotin transport system atp-binding protein | SAMN03080610_03398 | Not Available | Positive | 3627212 - 3627895 | 24931.3 |
| biotin transport system permease protein | SAMN03080610_03399 | Not Available | Positive | 3627892 - 3628590 | 24985.8 |
| biotin transport system substrate-specific component | SAMN03080610_03400 | Not Available | Positive | 3628557 - 3629120 | 19237.3 |
| branched-chain amino acid transport protein (azld) | SAMN03080610_03401 | Not Available | Negative | 3629150 - 3629500 | 11874.9 |
| predicted branched-chain amino acid permease (azaleucine resistance) | SAMN03080610_03402 | Not Available | Negative | 3629493 - 3630236 | 25292.9 |
| Trna-asn | Not Available | Not Available | Positive | 3630703 - 3630778 | Not Available |
| hypothetical protein | SAMN03080610_03404 | Not Available | Positive | 3630869 - 3631288 | 15350.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
