Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein, paat family | SAMN03080610_03375 | Not Available | Positive | 3606183 - 3606989 | 30353.8 |
| predicted purr-regulated permease perm | SAMN03080610_03376 | Not Available | Positive | 3607197 - 3608387 | 43059.0 |
| dna-binding transcriptional regulator, marr family | SAMN03080610_03377 | Not Available | Negative | 3608388 - 3608915 | 20117.4 |
| major facilitator superfamily protein | SAMN03080610_03378 | Not Available | Positive | 3609117 - 3609464 | 11933.6 |
| outer membrane protein ompa | SAMN03080610_03379 | Not Available | Negative | 3609586 - 3610458 | 32900.7 |
| hypothetical protein | SAMN03080610_03380 | Not Available | Positive | 3610600 - 3611373 | 29430.8 |
| ribosomal protein s18 acetylase rimi | SAMN03080610_03381 | Not Available | Negative | 3611400 - 3611960 | 20646.9 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN03080610_03382 | Not Available | Negative | 3611957 - 3612805 | 30593.1 |
| misacylated trna(ala) deacylase | SAMN03080610_03383 | Not Available | Negative | 3612808 - 3613539 | 26037.0 |
| cysteine synthase a | SAMN03080610_03384 | Not Available | Negative | 3613536 - 3614585 | 37008.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
