Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiolase, c-terminal domain | SAMN03080610_03354 | Not Available | Positive | 3586253 - 3586678 | 14419.6 |
| long-chain acyl-coa synthetase | SAMN03080610_03355 | Not Available | Positive | 3586682 - 3588199 | 54854.3 |
| iron complex transport system substrate-binding protein | SAMN03080610_03357 | Not Available | Positive | 3588833 - 3589840 | 36621.5 |
| iron complex transport system permease protein | SAMN03080610_03358 | Not Available | Positive | 3589853 - 3590902 | 35100.0 |
| iron complex transport system atp-binding protein | SAMN03080610_03359 | Not Available | Positive | 3590899 - 3591783 | 32227.0 |
| pseudoazurin | SAMN03080610_03360 | Not Available | Positive | 3591746 - 3592102 | 12431.1 |
| protein of unknown function | SAMN03080610_03361 | Not Available | Positive | 3592244 - 3592990 | 27747.2 |
| osmotically inducible protein osmc | SAMN03080610_03362 | Not Available | Positive | 3593133 - 3593564 | 14770.6 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN03080610_03363 | Not Available | Negative | 3593624 - 3595165 | 54818.1 |
| etc complex i subunit conserved region | SAMN03080610_03364 | Not Available | Positive | 3595534 - 3595839 | 11860.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
