Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tora specific chaperone | SAMN03080610_03344 | Not Available | Positive | 3574804 - 3575442 | 22204.3 |
| trimethylamine-n-oxide reductase (cytochrome c) | SAMN03080610_03345 | Not Available | Positive | 3575492 - 3577990 | 91496.7 |
| ba14k-like protein | SAMN03080610_03346 | Not Available | Negative | 3578167 - 3578478 | 11090.8 |
| protein of unknown function | SAMN03080610_03347 | Not Available | Positive | 3578687 - 3579247 | 19394.3 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_03348 | Not Available | Positive | 3579443 - 3580369 | 34102.5 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN03080610_03349 | Not Available | Positive | 3580535 - 3581698 | 42935.0 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN03080610_03350 | Not Available | Positive | 3581782 - 3582783 | 36692.2 |
| putative spermidine/putrescine transport system permease protein | SAMN03080610_03351 | Not Available | Positive | 3582780 - 3583751 | 34935.0 |
| putative spermidine/putrescine transport system permease protein | SAMN03080610_03352 | Not Available | Positive | 3583741 - 3584568 | 29775.9 |
| aminobutyraldehyde dehydrogenase | SAMN03080610_03353 | Not Available | Positive | 3584597 - 3586039 | 51096.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
