Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN03080610_03304 | Not Available | Positive | 3528791 - 3531253 | 90434.1 |
| membrane fusion protein, multidrug efflux system | SAMN03080610_03305 | Not Available | Positive | 3531365 - 3532474 | 39590.1 |
| multidrug efflux pump | SAMN03080610_03306 | Not Available | Positive | 3532471 - 3535563 | 111056.0 |
| transcriptional regulator, badm/rrf2 family | SAMN03080610_03307 | Not Available | Negative | 3535602 - 3536078 | 17147.9 |
| dna-binding transcriptional regulator, marr family | SAMN03080610_03308 | Not Available | Negative | 3536216 - 3536665 | 16481.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN03080610_03309 | Not Available | Negative | 3536827 - 3537561 | 27504.8 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN03080610_03310 | Not Available | Positive | 3537809 - 3540019 | 80658.6 |
| response regulator receiver domain-containing protein | SAMN03080610_03311 | Not Available | Positive | 3540166 - 3540558 | 13633.5 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN03080610_03312 | Not Available | Negative | 3540618 - 3541772 | 41637.7 |
| asparagine synthase (glutamine-hydrolysing) | SAMN03080610_03313 | Not Available | Positive | 3542276 - 3544051 | 65530.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
