Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase complex protein lldf | SAMN03080610_00273 | Not Available | Negative | 301544 - 302962 | 52244.8 |
| l-lactate dehydrogenase complex protein llde | SAMN03080610_00274 | Not Available | Negative | 302959 - 303744 | 27961.3 |
| cytochrome c | SAMN03080610_00275 | Not Available | Negative | 304122 - 304559 | 15521.4 |
| glycolate oxidase | SAMN03080610_00276 | Not Available | Positive | 304754 - 306247 | 53914.9 |
| glycolate oxidase fad binding subunit | SAMN03080610_00277 | Not Available | Positive | 306262 - 307461 | 42046.5 |
| hypothetical protein | SAMN03080610_00278 | Not Available | Positive | 307471 - 308097 | 23899.2 |
| glycolate oxidase iron-sulfur subunit | SAMN03080610_00279 | Not Available | Positive | 308097 - 309470 | 49824.7 |
| hypothetical protein | SAMN03080610_00280 | Not Available | Positive | 309493 - 310020 | 18485.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03080610_00281 | Not Available | Positive | 310150 - 310947 | 28624.1 |
| helix-turn-helix | SAMN03080610_00282 | Not Available | Negative | 310955 - 311362 | 14540.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
