Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN03080610_03284 | Not Available | Negative | 3512915 - 3513940 | 36224.2 |
| o-antigen biosynthesis protein wbqv | SAMN03080610_03285 | Not Available | Negative | 3513949 - 3515883 | 70798.4 |
| hypothetical protein | SAMN03080610_03286 | Not Available | Negative | 3516044 - 3517099 | 38685.1 |
| hypothetical protein | SAMN03080610_03287 | Not Available | Negative | 3517239 - 3517859 | 21366.7 |
| histidine phosphotransferase chpt | SAMN03080610_03288 | Not Available | Positive | 3518042 - 3518686 | 22515.1 |
| cell cycle transcriptional regulator ctra | SAMN03080610_03289 | Not Available | Negative | 3518787 - 3519488 | 26214.7 |
| hypothetical protein | SAMN03080610_03290 | Not Available | Positive | 3519882 - 3520253 | 13943.3 |
| hypothetical protein | SAMN03080610_03291 | Not Available | Negative | 3520305 - 3521069 | 28477.9 |
| Trna-pseudo | Not Available | Not Available | Positive | 3521095 - 3521171 | Not Available |
| branched-chain amino acid aminotransferase | SAMN03080610_03293 | Not Available | Negative | 3521258 - 3522184 | 33504.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
