Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN03080610_03274 | Not Available | Positive | 3501791 - 3502951 | 42754.9 |
| 2-methylcitrate dehydratase prpd | SAMN03080610_03275 | Not Available | Positive | 3502960 - 3504375 | 49059.8 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN03080610_03276 | Not Available | Positive | 3504365 - 3505240 | 30106.2 |
| meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductase | SAMN03080610_03277 | Not Available | Negative | 3505312 - 3506073 | 26924.7 |
| abc-2 type transport system permease protein | SAMN03080610_03278 | Not Available | Negative | 3506269 - 3507030 | 27988.2 |
| abc-2 type transport system atp-binding protein | SAMN03080610_03279 | Not Available | Negative | 3507027 - 3507998 | 35806.0 |
| homoprotocatechuate degradation operon regulator, hpar | SAMN03080610_03280 | Not Available | Negative | 3508089 - 3508565 | 18116.1 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN03080610_03281 | Not Available | Negative | 3508864 - 3510114 | 45065.2 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | SAMN03080610_03282 | Not Available | Negative | 3510384 - 3511505 | 42304.0 |
| o-antigen ligase | SAMN03080610_03283 | Not Available | Positive | 3511693 - 3512988 | 46738.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
