Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily c | SAMN03080610_03264 | Not Available | Positive | 3488341 - 3490701 | 83655.1 |
| hlyd family secretion protein | SAMN03080610_03265 | Not Available | Positive | 3490698 - 3492041 | 48749.2 |
| cyd operon protein ybgt | SAMN03080610_03266 | Not Available | Negative | 3492191 - 3492340 | 5648.78 |
| cytochrome d ubiquinol oxidase subunit ii | SAMN03080610_03267 | Not Available | Negative | 3492360 - 3493514 | 42173.3 |
| cytochrome d ubiquinol oxidase subunit i | SAMN03080610_03268 | Not Available | Negative | 3493520 - 3495097 | 58130.2 |
| atp-binding cassette, subfamily c, cydc | SAMN03080610_03269 | Not Available | Negative | 3495179 - 3496876 | 60033.4 |
| atp-binding cassette, subfamily c, cydd | SAMN03080610_03270 | Not Available | Negative | 3496873 - 3498531 | 57482.1 |
| dna-binding transcriptional regulator gbsr, marr family | SAMN03080610_03271 | Not Available | Negative | 3498633 - 3499211 | 21845.5 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_03272 | Not Available | Negative | 3499477 - 3500430 | 34212.2 |
| itaconate coa-transferase | SAMN03080610_03273 | Not Available | Positive | 3500611 - 3501789 | 42107.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
