Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_03243 | Not Available | Positive | 3467347 - 3469074 | 59539.3 |
| putative hydroxymethylpyrimidine transport system substrate-binding protein | SAMN03080610_03244 | Not Available | Negative | 3469111 - 3470049 | 34273.8 |
| putative hydroxymethylpyrimidine transport system permease protein | SAMN03080610_03245 | Not Available | Negative | 3470097 - 3470855 | 26402.4 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN03080610_03247 | Not Available | Positive | 3471110 - 3472054 | 34643.5 |
| threonine/homoserine efflux transporter rhta | SAMN03080610_03248 | Not Available | Positive | 3472065 - 3473012 | 32403.0 |
| rna polymerase sigma-32 factor | SAMN03080610_03249 | Not Available | Negative | 3473068 - 3473982 | 34796.5 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN03080610_03250 | Not Available | Negative | 3474146 - 3475156 | 36980.0 |
| hypothetical protein | SAMN03080610_03251 | Not Available | Positive | 3475203 - 3475565 | 12436.1 |
| Trna-glu | Not Available | Not Available | Positive | 3475999 - 3476074 | Not Available |
| putative peptidoglycan binding domain-containing protein | SAMN03080610_03253 | Not Available | Negative | 3476586 - 3477977 | 49714.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
