Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, upf0335 family | SAMN03080610_03222 | Not Available | Positive | 3443111 - 3443395 | 10507.4 |
| glycerol-3-phosphate dehydrogenase | SAMN03080610_03223 | Not Available | Positive | 3443512 - 3445032 | 56234.9 |
| uncharacterized conserved protein ycbk, duf882 family | SAMN03080610_03224 | Not Available | Negative | 3445094 - 3446887 | 63696.8 |
| murein l,d-transpeptidase ycbb/ykud | SAMN03080610_03225 | Not Available | Negative | 3447042 - 3448880 | 67567.4 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN03080610_03226 | Not Available | Negative | 3448920 - 3450449 | 55790.3 |
| oligoendopeptidase f | SAMN03080610_03227 | Not Available | Positive | 3450705 - 3452567 | 69270.1 |
| predicted unusual protein kinase regulating ubiquinone biosynthesis, aarf/abc1/ubib family | SAMN03080610_03228 | Not Available | Positive | 3453077 - 3454480 | 52492.8 |
| hypothetical protein | SAMN03080610_03229 | Not Available | Positive | 3454509 - 3454859 | 12261.5 |
| aa3 type cytochrome c oxidase subunit iv | SAMN03080610_03230 | Not Available | Positive | 3455034 - 3455321 | 10319.9 |
| nad(p) transhydrogenase subunit alpha | SAMN03080610_03231 | Not Available | Positive | 3455333 - 3456484 | 40119.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
