Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | Positive | 289288 - 289364 | Not Available |
| phasin | SAMN03080610_00264 | Not Available | Negative | 290045 - 290587 | 19871.1 |
| pas domain s-box-containing protein | SAMN03080610_00265 | Not Available | Positive | 290837 - 294127 | 117137.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_00266 | Not Available | Negative | 294149 - 295324 | 42604.8 |
| glutamate--cysteine ligase | SAMN03080610_00267 | Not Available | Negative | 295622 - 296995 | 51333.4 |
| hypothetical protein | SAMN03080610_00268 | Not Available | Positive | 297173 - 297697 | 18145.8 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN03080610_00269 | Not Available | Negative | 297735 - 298487 | 27253.7 |
| exodeoxyribonuclease vii large subunit | SAMN03080610_00270 | Not Available | Positive | 298556 - 300163 | 58625.3 |
| hypothetical protein | SAMN03080610_00271 | Not Available | Positive | 300271 - 300837 | 20403.5 |
| l-lactate dehydrogenase complex protein lldg | SAMN03080610_00272 | Not Available | Negative | 300847 - 301524 | 24352.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
