Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose 1-dehydrogenase | SAMN03080610_03172 | Not Available | Positive | 3400814 - 3401623 | 28127.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03080610_03173 | Not Available | Positive | 3401695 - 3402483 | 27371.0 |
| holliday junction endonuclease ruvc | SAMN03080610_03174 | Not Available | Positive | 3402522 - 3403148 | 21589.0 |
| looped-hinge helix dna binding domain-containing protein, abrb family | SAMN03080610_03175 | Not Available | Positive | 3403235 - 3403483 | 9084.93 |
| hypothetical protein | SAMN03080610_03176 | Not Available | Positive | 3403476 - 3403892 | 15775.8 |
| holliday junction dna helicase subunit ruva | SAMN03080610_03177 | Not Available | Positive | 3403889 - 3404515 | 21656.1 |
| holliday junction dna helicase subunit ruvb | SAMN03080610_03178 | Not Available | Positive | 3404512 - 3405561 | 38124.8 |
| (3s)-malyl-coa thioesterase | SAMN03080610_03179 | Not Available | Positive | 3405554 - 3406003 | 16554.0 |
| hypothetical protein | SAMN03080610_03180 | Not Available | Negative | 3406008 - 3406145 | 4785.67 |
| cell division and transport-associated protein tolq | SAMN03080610_03181 | Not Available | Positive | 3406390 - 3407103 | 25899.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
