Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase | SAMN03080610_03161 | Not Available | Negative | 3389189 - 3390220 | 37262.1 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN03080610_03162 | Not Available | Negative | 3390316 - 3391137 | 30882.7 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN03080610_03163 | Not Available | Negative | 3391202 - 3392095 | 33271.7 |
| uncharacterized conserved protein | SAMN03080610_03164 | Not Available | Negative | 3392275 - 3392700 | 15914.7 |
| hypothetical protein | SAMN03080610_03165 | Not Available | Negative | 3392778 - 3393608 | 29964.0 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN03080610_03166 | Not Available | Negative | 3393605 - 3394192 | 21356.6 |
| nucleotide-binding universal stress protein, uspa family | SAMN03080610_03168 | Not Available | Positive | 3394630 - 3395043 | 14724.3 |
| propionyl-coa synthetase | SAMN03080610_03169 | Not Available | Positive | 3395148 - 3397061 | 70345.3 |
| multidrug resistance protein, mate family | SAMN03080610_03170 | Not Available | Negative | 3397176 - 3398603 | 50183.4 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN03080610_03171 | Not Available | Positive | 3398808 - 3400622 | 68403.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
