Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_03151 | Not Available | Positive | 3378617 - 3379378 | 26062.7 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN03080610_03152 | Not Available | Negative | 3379469 - 3380218 | 26930.2 |
| hypothetical protein | SAMN03080610_03153 | Not Available | Positive | 3380567 - 3380824 | 9566.59 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN03080610_03154 | Not Available | Negative | 3380909 - 3381928 | 36616.4 |
| response regulator receiver domain-containing protein | SAMN03080610_03155 | Not Available | Negative | 3381954 - 3382403 | 16627.0 |
| hypothetical protein | SAMN03080610_03156 | Not Available | Negative | 3382413 - 3383885 | 54672.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN03080610_03157 | Not Available | Negative | 3384081 - 3384842 | 28229.8 |
| bacteriophytochrome (light-regulated signal transduction histidine kinase) | SAMN03080610_03158 | Not Available | Positive | 3385424 - 3387973 | 93596.6 |
| putative acetyltransferase | SAMN03080610_03159 | Not Available | Negative | 3387991 - 3388512 | 18409.2 |
| nad(p)h-dependent fmn reductase | SAMN03080610_03160 | Not Available | Negative | 3388637 - 3389185 | 19135.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
