Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetraheme cytochrome c subunit of nitrate or tmao reductase | SAMN03080610_03141 | Not Available | Positive | 3369980 - 3370588 | 21839.4 |
| ribosome association toxin past (rata) of the ratab toxin-antitoxin module | SAMN03080610_03142 | Not Available | Positive | 3370643 - 3371134 | 18349.9 |
| Trna-met | Not Available | Not Available | Positive | 3371243 - 3371319 | Not Available |
| hypothetical protein | SAMN03080610_03144 | Not Available | Positive | 3371413 - 3373176 | 67256.1 |
| hypothetical protein | SAMN03080610_03145 | Not Available | Positive | 3373779 - 3374843 | 38098.4 |
| transposase domain | SAMN03080610_03146 | Not Available | Negative | 3375046 - 3375343 | 11462.1 |
| regulator of ctra degradation | SAMN03080610_03147 | Not Available | Negative | 3375568 - 3376092 | 19268.9 |
| uncharacterized small protein, duf1192 family | SAMN03080610_03148 | Not Available | Negative | 3376412 - 3376600 | 6989.38 |
| putative nad(p)h quinone oxidoreductase, pig3 family | SAMN03080610_03149 | Not Available | Positive | 3376740 - 3377744 | 35221.3 |
| hypothetical protein | SAMN03080610_03150 | Not Available | Positive | 3377884 - 3378570 | 25420.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
