Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like enzyme, putative cysteine protease | SAMN03080610_03131 | Not Available | Positive | 3361701 - 3362504 | 28646.6 |
| putative proteasome-type protease | SAMN03080610_03132 | Not Available | Positive | 3362534 - 3363334 | 29502.4 |
| cupin domain-containing protein | SAMN03080610_03133 | Not Available | Negative | 3363331 - 3363807 | 16660.7 |
| transcriptional regulator, tetr family | SAMN03080610_03134 | Not Available | Positive | 3363906 - 3364532 | 22373.7 |
| dna-binding transcriptional regulator, lysr family | SAMN03080610_03135 | Not Available | Negative | 3364487 - 3365491 | 36133.9 |
| predicted oxidoreductase | SAMN03080610_03136 | Not Available | Positive | 3365539 - 3366639 | 39437.9 |
| malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase | SAMN03080610_03137 | Not Available | Negative | 3366739 - 3368235 | 53741.8 |
| hypothetical protein | SAMN03080610_03138 | Not Available | Positive | 3368392 - 3369141 | 28593.8 |
| protein of unknown function | SAMN03080610_03139 | Not Available | Positive | 3369293 - 3369451 | 5552.38 |
| hypothetical protein | SAMN03080610_03140 | Not Available | Positive | 3369580 - 3369852 | 9628.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
