Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN03080610_03121 | Not Available | Negative | 3353211 - 3353696 | 17674.2 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN03080610_03122 | Not Available | Positive | 3353789 - 3354712 | 34452.5 |
| hypothetical protein | SAMN03080610_03123 | Not Available | Negative | 3354699 - 3355274 | 21716.2 |
| cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebsc | SAMN03080610_03124 | Not Available | Positive | 3355386 - 3355862 | 16552.7 |
| hypothetical protein | SAMN03080610_03125 | Not Available | Positive | 3356056 - 3356268 | 7811.33 |
| cytochrome c553 | SAMN03080610_03126 | Not Available | Negative | 3356318 - 3357544 | 44961.2 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN03080610_03127 | Not Available | Negative | 3357727 - 3358485 | 26633.1 |
| l,d-transpeptidase catalytic domain | SAMN03080610_03128 | Not Available | Negative | 3358567 - 3358992 | 15894.5 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN03080610_03129 | Not Available | Positive | 3359236 - 3360684 | 53759.0 |
| uncharacterized conserved protein, alpha-e superfamily | SAMN03080610_03130 | Not Available | Positive | 3360778 - 3361698 | 35376.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
