Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose transport system permease protein | SAMN03080610_00253 | Not Available | Negative | 278553 - 279581 | 35719.6 |
| ribose transport system atp-binding protein | SAMN03080610_00254 | Not Available | Negative | 279550 - 281049 | 54323.5 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN03080610_00255 | Not Available | Positive | 281269 - 282450 | 41385.3 |
| transcriptional regulator, xre family with cupin sensor | SAMN03080610_00256 | Not Available | Negative | 282480 - 283076 | 21815.8 |
| benzoate membrane transport protein | SAMN03080610_00257 | Not Available | Positive | 283176 - 284369 | 41030.3 |
| hypothetical protein | SAMN03080610_00258 | Not Available | Positive | 284500 - 284706 | 7302.61 |
| hypothetical protein | SAMN03080610_00259 | Not Available | Positive | 284850 - 286640 | 63692.7 |
| hypothetical protein | SAMN03080610_00260 | Not Available | Positive | 286771 - 288420 | 60219.4 |
| hypothetical protein | SAMN03080610_00261 | Not Available | Negative | 288288 - 288665 | 13251.6 |
| hypothetical protein | SAMN03080610_00262 | Not Available | Positive | 288762 - 288914 | 5679.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
