Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_03041 | Not Available | Negative | 3279132 - 3280001 | 31795.3 |
| hypothetical protein | SAMN03080610_03042 | Not Available | Negative | 3280141 - 3280266 | 4912.07 |
| helix-turn-helix domain-containing protein | SAMN03080610_03043 | Not Available | Positive | 3280480 - 3280764 | 10582.5 |
| carbamoyl-phosphate synthase large subunit | SAMN03080610_03044 | Not Available | Positive | 3280849 - 3284190 | 119810.0 |
| transcription elongation factor grea | SAMN03080610_03045 | Not Available | Positive | 3284284 - 3284757 | 17028.1 |
| glutathione s-transferase | SAMN03080610_03046 | Not Available | Positive | 3284862 - 3285491 | 23946.7 |
| hypothetical protein | SAMN03080610_03047 | Not Available | Negative | 3285577 - 3286236 | 22630.0 |
| glutathione s-transferase | SAMN03080610_03048 | Not Available | Negative | 3286382 - 3287029 | 23904.5 |
| aspartate aminotransferase | SAMN03080610_03049 | Not Available | Positive | 3287224 - 3288426 | 43458.9 |
| cold shock protein (beta-ribbon, cspa family) | SAMN03080610_03050 | Not Available | Negative | 3288623 - 3289318 | 23213.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
