Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type c4-dicarboxylate transport system, small permease component | SAMN03080610_03031 | Not Available | Negative | 3268744 - 3269229 | 17909.0 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN03080610_03032 | Not Available | Negative | 3269294 - 3270295 | 37054.8 |
| Trna-met | Not Available | Not Available | Positive | 3270529 - 3270605 | Not Available |
| hypothetical protein | SAMN03080610_03034 | Not Available | Positive | 3270730 - 3271449 | 25624.5 |
| rna polymerase, sigma 70 subunit, rpod | SAMN03080610_03035 | Not Available | Negative | 3271540 - 3273531 | 75275.2 |
| dna primase | SAMN03080610_03036 | Not Available | Negative | 3273697 - 3275655 | 71049.8 |
| protein of unknown function | SAMN03080610_03037 | Not Available | Negative | 3275760 - 3276494 | 27588.3 |
| hypothetical protein | SAMN03080610_03038 | Not Available | Negative | 3276656 - 3277120 | 17626.2 |
| carbamoyl-phosphate synthase small subunit | SAMN03080610_03039 | Not Available | Positive | 3277358 - 3278557 | 42698.4 |
| protein of unknown function | SAMN03080610_03040 | Not Available | Negative | 3278598 - 3279122 | 19128.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
