Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, multidrug efflux system | SAMN03080610_03011 | Not Available | Positive | 3243975 - 3245084 | 39133.0 |
| multidrug efflux pump | SAMN03080610_03012 | Not Available | Positive | 3245094 - 3248243 | 112102.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN03080610_03013 | Not Available | Positive | 3248280 - 3249782 | 53759.3 |
| membrane fusion protein, macrolide-specific efflux system | SAMN03080610_03014 | Not Available | Positive | 3249804 - 3251018 | 43441.5 |
| macrolide transport system atp-binding/permease protein | SAMN03080610_03015 | Not Available | Positive | 3251022 - 3252977 | 69380.7 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | SAMN03080610_03016 | Not Available | Negative | 3253026 - 3253955 | 33362.3 |
| hypothetical protein | SAMN03080610_03017 | Not Available | Negative | 3253989 - 3255143 | 39647.8 |
| dna-binding transcriptional regulator, gntr family | SAMN03080610_03018 | Not Available | Negative | 3255140 - 3255817 | 24578.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN03080610_03019 | Not Available | Positive | 3256033 - 3257025 | 35625.2 |
| tripartite tricarboxylate transporter tctb family protein | SAMN03080610_03020 | Not Available | Positive | 3257102 - 3257554 | 16347.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
