Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene synthase | SAMN03080610_03001 | Not Available | Negative | 3230271 - 3231329 | 38862.9 |
| phytoene desaturase | SAMN03080610_03002 | Not Available | Negative | 3231310 - 3232803 | 55693.5 |
| magnesium chelatase accessory protein | SAMN03080610_03003 | Not Available | Negative | 3232929 - 3233822 | 32405.0 |
| protoporphyrin ix magnesium-chelatase | SAMN03080610_03004 | Not Available | Negative | 3233885 - 3235690 | 63153.6 |
| protoporphyrin ix magnesium-chelatase | SAMN03080610_03005 | Not Available | Negative | 3235704 - 3236729 | 36953.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN03080610_03006 | Not Available | Negative | 3236949 - 3237908 | 34762.6 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN03080610_03007 | Not Available | Positive | 3238094 - 3240364 | 84118.7 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN03080610_03008 | Not Available | Negative | 3240380 - 3241567 | 42310.7 |
| glutaryl-coa dehydrogenase | SAMN03080610_03009 | Not Available | Negative | 3241588 - 3242796 | 44322.0 |
| transcriptional regulator, tetr family | SAMN03080610_03010 | Not Available | Negative | 3242819 - 3243508 | 25962.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
