Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Diguanylate cyclase | SAMN03080610_00616 | Not Available | Positive | 662838 - 664160 | 48844.6 |
| Attr | Not Available | Not Available | Positive | 676689 - 676700 | Not Available |
| Portal protein | SAMN03080610_00646 | Not Available | Positive | 689928 - 691079 | 42067.9 |
| hypothetical protein | SAMN03080610_00647 | Not Available | Negative | 691127 - 691966 | 28788.7 |
| Gp58 | SAMN03080610_00648 | Not Available | Positive | 692094 - 692873 | 28345.3 |
| hypothetical protein | SAMN03080610_00649 | Not Available | Positive | 692933 - 693121 | 7088.5 |
| hypothetical protein | SAMN03080610_00650 | Not Available | Positive | 693137 - 693304 | 6269.58 |
| Putative prohead protease | SAMN03080610_00651 | Not Available | Positive | 693301 - 693897 | 21588.3 |
| Phage major capsid protein | SAMN03080610_00652 | Not Available | Positive | 693921 - 695246 | 47237.0 |
| Dna packaging/head-tail-connector | SAMN03080610_00653 | Not Available | Positive | 695390 - 695944 | 20178.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
