Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN03080610_02961 | Not Available | Negative | 3188574 - 3189650 | 39554.1 |
| transposase domain | SAMN03080610_02962 | Not Available | Positive | 3189882 - 3190150 | 10288.6 |
| transposase domain | SAMN03080610_02963 | Not Available | Negative | 3190151 - 3190455 | 11632.3 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN03080610_02964 | Not Available | Negative | 3190561 - 3191613 | 37700.4 |
| hypothetical protein | SAMN03080610_02965 | Not Available | Negative | 3191690 - 3191953 | 9325.81 |
| geranylgeranyl reductase | SAMN03080610_02966 | Not Available | Negative | 3191975 - 3193213 | 45260.9 |
| mfs transporter, bcd family, chlorophyll transporter | SAMN03080610_02967 | Not Available | Negative | 3193216 - 3194583 | 46849.8 |
| chlorophyll synthase | SAMN03080610_02968 | Not Available | Negative | 3194585 - 3195712 | 40142.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN03080610_02969 | Not Available | Positive | 3195786 - 3196676 | 33357.5 |
| transcriptional regulator ppsr | SAMN03080610_02970 | Not Available | Negative | 3196725 - 3198173 | 53232.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
