Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna ligase ligd phosphoesterase module /atp-dependent dna ligase ligd polymerase module | SAMN03080610_02921 | Not Available | Negative | 3132072 - 3134714 | 96699.6 |
| dna end-binding protein ku | SAMN03080610_02922 | Not Available | Negative | 3134724 - 3135665 | 34318.7 |
| 3-hydroxybutyrate dehydrogenase | SAMN03080610_02923 | Not Available | Positive | 3135829 - 3136608 | 27411.0 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN03080610_02924 | Not Available | Positive | 3136651 - 3137238 | 20309.9 |
| pyruvate carboxylase | SAMN03080610_02925 | Not Available | Negative | 3137248 - 3140730 | 127676.0 |
| hypothetical protein | SAMN03080610_02926 | Not Available | Negative | 3140844 - 3141125 | 8942.78 |
| maltooligosyl trehalose synthase | SAMN03080610_02927 | Not Available | Negative | 3141254 - 3143959 | 99874.1 |
| maltooligosyl trehalose hydrolase | SAMN03080610_02928 | Not Available | Negative | 3143952 - 3145733 | 65962.2 |
| hippurate hydrolase | SAMN03080610_02929 | Not Available | Negative | 3145848 - 3147011 | 41507.5 |
| trap transporter, 4tm/12tm fusion protein | SAMN03080610_02930 | Not Available | Negative | 3147100 - 3149292 | 76199.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
