Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN03080610_02901 | Not Available | Positive | 3109803 - 3110663 | 30789.8 |
| dna gyrase subunit b | SAMN03080610_02902 | Not Available | Negative | 3110728 - 3113163 | 89518.6 |
| dna replication and repair protein recf | SAMN03080610_02903 | Not Available | Negative | 3113263 - 3114408 | 39775.5 |
| dna polymerase iii, beta subunit | SAMN03080610_02904 | Not Available | Negative | 3114413 - 3115528 | 40573.7 |
| chromosomal replication initiator protein | SAMN03080610_02905 | Not Available | Negative | 3115703 - 3117148 | 54066.2 |
| thiosulfate sulfurtransferase | SAMN03080610_02906 | Not Available | Negative | 3117217 - 3117651 | 15319.0 |
| ssu ribosomal protein s20p | SAMN03080610_02907 | Not Available | Negative | 3118318 - 3118581 | 9556.61 |
| carbon-monoxide dehydrogenase medium subunit | SAMN03080610_02908 | Not Available | Negative | 3118895 - 3119713 | 28519.7 |
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN03080610_02909 | Not Available | Negative | 3119725 - 3122097 | 84284.0 |
| carbon-monoxide dehydrogenase small subunit | SAMN03080610_02910 | Not Available | Negative | 3122179 - 3122670 | 17655.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
