Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, sensor kinase | SAMN03080610_00232 | Not Available | Negative | 257135 - 258523 | 50765.2 |
| two-component system, ompr family, response regulator | SAMN03080610_00233 | Not Available | Negative | 258520 - 259179 | 24083.9 |
| hypothetical protein | SAMN03080610_00234 | Not Available | Positive | 259320 - 259796 | 17217.8 |
| hypothetical protein | SAMN03080610_00235 | Not Available | Negative | 259875 - 260375 | 17966.2 |
| predicted fe-s protein ydhl, duf1289 family | SAMN03080610_00236 | Not Available | Negative | 260606 - 261511 | 32307.6 |
| iron complex transport system atp-binding protein | SAMN03080610_00237 | Not Available | Negative | 261551 - 262438 | 31790.6 |
| iron complex transport system permease protein | SAMN03080610_00238 | Not Available | Negative | 262435 - 263460 | 34599.4 |
| iron complex transport system substrate-binding protein | SAMN03080610_00239 | Not Available | Negative | 263457 - 264302 | 30730.3 |
| vitamin b12 transporter | SAMN03080610_00240 | Not Available | Negative | 264302 - 266263 | 71127.1 |
| acyl-coa hydrolase | SAMN03080610_00242 | Not Available | Positive | 267055 - 267849 | 28375.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
