Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 3101424 - 3101500 | Not Available |
| methyltransferase domain-containing protein | SAMN03080610_02892 | Not Available | Positive | 3101860 - 3102480 | 22067.1 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN03080610_02893 | Not Available | Positive | 3102575 - 3102925 | 11861.1 |
| ribosome-associated protein | SAMN03080610_02894 | Not Available | Positive | 3103008 - 3103421 | 15511.9 |
| acetoin utilization deacetylase acuc | SAMN03080610_02895 | Not Available | Positive | 3103500 - 3104615 | 40472.1 |
| glyoxylase, beta-lactamase superfamily ii | SAMN03080610_02896 | Not Available | Negative | 3104694 - 3105722 | 37270.8 |
| uncharacterized protein involved in response to no | SAMN03080610_02897 | Not Available | Negative | 3105832 - 3107040 | 42057.4 |
| uncharacterized conserved protein, duf2249 family | SAMN03080610_02898 | Not Available | Negative | 3107051 - 3107293 | 9249.13 |
| aminoglycoside 3'-phosphotransferase-1 | SAMN03080610_02899 | Not Available | Negative | 3107429 - 3108244 | 30330.9 |
| nitrite reductase (no-forming) | SAMN03080610_02900 | Not Available | Positive | 3108579 - 3109703 | 40129.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
