Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucoside transport system atp-binding protein | SAMN03080610_02871 | Not Available | Negative | 3078312 - 3079460 | 41770.6 |
| glycine/d-amino acid oxidase | SAMN03080610_02872 | Not Available | Negative | 3079586 - 3081004 | 50662.5 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN03080610_02873 | Not Available | Negative | 3081145 - 3082005 | 31778.7 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN03080610_02874 | Not Available | Negative | 3081999 - 3082847 | 31678.8 |
| raffinose/stachyose/melibiose transport system substrate-binding protein | SAMN03080610_02875 | Not Available | Negative | 3082966 - 3084198 | 44976.7 |
| protein frlc | SAMN03080610_02876 | Not Available | Negative | 3085014 - 3085856 | 31009.8 |
| gntr family transcriptional regulator | SAMN03080610_02877 | Not Available | Negative | 3086000 - 3086758 | 27842.4 |
| fructoselysine-6-p-deglycase frlb with duplicated sugar isomerase (sis) domain | SAMN03080610_02878 | Not Available | Positive | 3086979 - 3087992 | 36621.0 |
| fructoselysine 6-kinase | SAMN03080610_02879 | Not Available | Positive | 3087979 - 3088815 | 28956.8 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN03080610_02880 | Not Available | Negative | 3088948 - 3092718 | 120430.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
